is your amplifier connected to mains (not isolated)? if no ie if its isolated, no need 2 probes trick, one probe, probe's gnd to circuit's gnd is the normal way. DS1000Z math function is hopeless unless for some very slow update rate applications or while noise figure is not important or when you have nothing else better. if you still insist, you can see for yourself by pressing math button, choose (A - B) choose which channel to become A and which to become B, and turn on the math display, its all in the menu.