So you're injecting a MHz squarewave into the scope and then adding a bunch of stuff to the circuit (cables ...) and its having some effect. Depending on edge rates, I can certainly understand this. The fix may not be to find infinite impedance meters and reflectionless test leads.
Depending what you have for probes, maybe you could flip the setup so the squarewave attaches to the meter using what ever the required termination is, then use a scope probe that fits what ever loading requirements you have.