Most recent but one version, so .4 I think.
It's an intlib, saved and compiled as a matter of course. The specific issue that caused this thread was where I had a TFT display, attached by pin header. I'd done the 3D model with head, placed and essentially finished, then realised it hadn't got any legs for support. Added those as extrusions, (compiled, saved) updated schematic and the correct model, complete with legs, showed in the part properties panel. Pushed to PCB and the 3D view didn't have the legs.
I tried a minimal board as above using project libs, but that worked fine. I suspect it's to do with the intlib. Just been too busy to devote time to this at the moment.
Oh, another problem: set PCB grid to something reasonable (1mm, say) and use the grid for snap. Create a board outline. Set the origin to somewhere reasonable (middle, say) and when you place it it's actually placed one snap to the left of the mouse pointer. Again, haven't had time to progress this and it's not actually fatal (nor used that often).