First, if you use that transformer in a 2 diode, center tap configuration there will not be enough voltage to charge the battery. Only half the transformer is working at any given time so you have a full wave 6 volt transformer. Forget about the center tap and use a bridge rectifier. With diode drops, even 12 volts might not be enough. A 12 volt battery charger transformer is more like 15 volts. With a regulator, you definitely are low on voltage. On the other hand, a 100Ah battery is best charged at 0.1C which in your case is 10Amps. Hook your transformer up with rectifiers. Try it both ways.Use an ammeter. See what kind of current you get. I think you'll need to rewind with more turns of thinner wire.
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