yes, what are you doing with them, are you trying to connect them in parallel ?
I'm guessing you have a 5V and a 3.3V driven off it ? that is fine but do remember that the 5V one must be able to take the current for both 5V and 3.3V. If you have a low current requirement of the 3.3V and are dropping to 5V from a high voltage like 12v I'd suggest separating them to take some thermal load off the 5V one unless of course it is well over speced and maybe your trying to get very stable 3.3V