The BF412 in the BMA-200 acts as a pre-amplifier with gain of 2 and very high input impedance. It also provides trimming for CMRR and DC offset. Due to its near infinite input impedance and very low bias current, it has near zero current noise, so is ideal for buffering very high impedance signal sources.
The AMP01 is bipolar input, rather than FET input like the BF412. As such it has higher bias currents and higher current noise, which means that if the impedance of your signal is more than about 200 kOhms, it will likely give more noise than the BF412.
I've downloaded your last wav file, and done some measurements with it. Unfortunately, the netech simulator does not appear to be properly specified, and none of the documentation states what "10 uV" means (rms, VPeak, or Vpeak-peak). In order to do calculations I've just had to assume that the netech is calibated, and by what is meant by amplitude. In my previous calculations I'd assumed rms, but after some consideration, I wonder if it is supposed to be Vp-p.
Anyhow, assuming that it is Vp-p, then I estimate around 60 nV/sqrtHz broadband noise in the 50-100 Hz range, rising below about 50 Hz - which is pretty close to what I simulated for the BF412 input stage.
Some physiological amplifiers specify noise over a band, which can make comparison difficult. For example, one amplifier specifies 0.4 uV rms between 1-30 Hz. This is a fairly average for FET amplifier, and basically equivalent to the BF412 amplifier in the BMA-200 (i.e. this amplifier would provide similar noise to your current system).