Hi!
I recommend a method that two former British TV makers, RBM and Rediffusion/Doric used, as well as B & O in the 1970s & 1980s, and that is to prefix every reference with a number for each PCB, for example, suppose you're making a Curve Tracer with four boards and some chassis/case wiring,
you could have:–
1) Case wiring – On/off switch 0SW1, mains fuse 0F1, etc.,
2) Power supply for collector:– 1R1, 1C1, 1D1, etc.,
3) Step Generator:– 2R1, 2C1, 2D1, etc.,
This method has the advantage of starting every board/unit/sub–section at 1, and unlike three–digit references "Rxxx" you not stuck if you've got over 100 components of a given type!
Incidentally it's not necessary to number each section 1R1, etc., a simple text note on the circuit/pcb stating "Component Prefix 1" etc., is all you need!
Chris Williams