I agree, it's definitely a non-trivial exercise to get a Zynq running.
Much as it leaves a lot to be desired as a test instrument and mid-level deveopment, the Red Pitaya is the least worst option I've encountered in terms of a reasonable cost development and proof of concept platform for the Zynq. The hardware is reasonably sound, it's just the nonsense around the documentation, much of which is out of date, and the way they try to monetize it by selling half baked apps.
Remember that this is an application processor plus FPGA, so typically you'll probably choose to get Linux running on it, which in itself is a significant project if doing it from scratch. For the project I used it on, we use Red Pitaya boards directly with our own hardware (frequency agile RF quadrature up and down converters). It's very low volume so we'd be nuts to spend months getting our own board working.
Another board I tried was the Zybo, which has a tutorial book
http://www.zynqbook.com/downloads/The_Zynq_Book_Tutorials_Aug_15.pdf but I found it was geared towards ticking a few course boxes for students rather than getting you to a position where you could realistically do something with it on your own.