A closer reading of the theory of operations and troubleshooting might help, but to me the problem sounds rather in the digital section. Quite possibly the front panel. It could be either the power supply of these sections or the sections themselves, but that's where I would start looking. The manual has some details about what the different beeps mean etc. I believe a single beep is supposed to identify the start of the self tests? Then apparently it gets stuck there. What's the first self test it would run?
I'm confused. So there's 14V across CR27, which I'm guessing it means it's reverse biased, because a 14V forward voltage would mean a dead diode. How can Vgs then be a positive number? However, ignoring conflicting readings seeing the difference in voltage across the pass transistors, it sounds like in the "bad" case the pre-regulator is set to the maximum output voltage. Since the pre-regulator is controlled from the floating logic, I'm still suspecting a digital problem.