Corrupted service settings could kill one port at a time, but it would be just as likely to kill them all or kill something else like the tuner. You cant fix that sort of thing without the service manual. If you are lucky, that + the original remote is all that's needed, but on some makes/models you need a specific test jig or a PC interface cable and special service software.
U6 is only a $6 USD chip, so if you cant find a free copy of the service manual, getting someone experienced at SMD rework to change it would probably be a worthwhile gamble.