Thanks for all the help so far. There is no sign of burned/faulty components or traces (visual & smell test). The rectifier diodes all test ok. I did not clarify that only the input fuse blows repeatedly. All other fuses test OK.
If when you disconnect the outputs of the transformer it stops blowing fuses, reconnect one section of the power supply at a time and see which one starts to blow the fuses. Process of elimination will give you a very good starting point of what area to investigate.
Thanks for that! I tested in this way, both secondary supplies run OK, the unit, fan and display power up. So the problem must be after the primary transformer output(s).
C101 and C103 are still showing short-circuit. So I'm guessing it can be either of the components between XTIP2-1 and XTIP2-3 (see snip). I think it now makes more sense to start desoldering the caps and checking that the short goes away, what do you think?
Photos (sort of crappy) of the PCB are attached.
Thanks for all the help!