That click you hear is a relay which switches from baseband to harmonic mixer above something around 2.3GHz.
The harmonic mixer has a yig tuned filter in front of it which is most probably misaligned. See if it gets better by pressing the 'PRESEL PEAK' button on the SA box.
If not, you could try to manually tune the YTF by using a lab power supply. If this also doesn't fix it, either the relay(s) are broken or the YTF/mixer assembly is broken.