If you're worried about it, install a few 100nf chip capacitors in the appropriate physical size in their place. I'd bet that's what was originally there. The value of decoupling capacitors is usually not terribly critical and in most cases stuff will work acceptably with some of them missing.
When I'm designing things I tend to sprinkle in decoupling pretty liberally since they're cheap insurance against glitches, I don't bother trying to calculate the bare minimum I can get away with and I think a lot of gear is designed similarly.