Maybe you installed the bridge rectifier the wrong way round.
Look at the capacitors and diodes to see what would happen if you did that.
Here's a picture of one of them, including one of the big caps, and the backside:
https://ibb.co/YTg9Wtbhttps://ibb.co/p0JDjcFhttps://ibb.co/ThN56NZThe marking on the right side (negative) of the big cap is opposite of the + symbol on the board itself as you can see. The other big cap is oriented the same way. The rectifier pictured is definitely the correct orientation, and the other one matches the + symbols too.
Which capacitors did you originally replace? I'd assumed you mean the main filter caps (C1, C21) but if so then the 35v rating you have used is not sufficient. This would not have caused the demise of C33/C34, but it's possible you cause short circuit around REG3 whilst replacing the filter caps which lead to the unregulated supply voltage being applied to the output. That would certainly have smoked the caps.
Weird, the reason I went with the exact caps I posted earlier is that a guy named Jim Williams and two others used those exact same caps. I even asked why those would work being only 35v but I never got an answer. Beats me, but I trusted them and ordered the ones they posted.
Also, did you measure the 48V output when you had the caps disconnected?
If something else went wrong, there may be more than 63V across them.
Lastly, what are the specs (capacitance / value) of the new C3 and C4 that you used?
15000uf 35v. Ok, here's the thing. I'm not a tech and don't know electronics well. I was going to simply replace the parts I posted earlier and hope for the best, since other people have done the same thing with good results. I mention all of that because being kind of new to this, I honestly can't figure out where to put my probes to test, and how to readjust the 48v output (and neither could another guy I talked to but his was 100% fine after modding it just like I did).
I was hoping to save $250 on shipping and tech service fees and do it myself, and most importantly learn a bit in the process. We all have to start somewhere, and I guess my journey into electronics starts with smoking capacitors
