I think the firmware sees the chanel numbering as 0 indexed, i.e. 0, 1, 2, 3 corresponds to physical channels 1, 2, 3, 4. So I would look for problems on channel 4
Try swapping the channel 1 and channel 4 hybrid (don't forget the thermal paste on the chip on the hybrid module!) and see what happens.
I keep saying it and will say it again.... Be careful with the hybrids, and make sure they are perfectly seated in the metal holder before screwing it to the PCB!
Easy tests are easy, so may as well rule out bad relays or bad hybrid module.