I was able to successfully "float" the acquisition board, from the main processing board. I tried nylon and fiber washers, but then realized the through holes (bolt down points) were part of the ground/isolation plane (beeped them out). So I wound up using split lock washers (very small aluminum) on the backside of the main board, where the screws feed through. I tested the expansion and it offers a decent amount of "play" in the connector. enough to allow for movement under a thermal condition.
Everything fit fine in the chassis, and the backspacing on the screws doesn't interrupt any critical mechanical spacing.
Scope is back together and running flawlessly. I also modified the spacing on the LC bus daughter card, using a nylon washer on top (replacing the steel unit).
I did some testing on the draw of the delta fans, and they weren't acceptable (over 10 watts/fan).
With the new CPU the cpu fan is running on overdrive 90% of the time. I used some Antec series 7 thermal compound on the CPU block, but it just isn't a large enough mass or fan to cope with the increased heat. I am going to have a new CPU block cut and utilize some more of the horizontal space in the mobo enclosure. I noticed a chassis opening just beside the block, so I might have it cut and install a semi-external passive cooling solution. The amount of heat being kicked out of the scope is WAY beyond where it was with the Celeron. I am a bit concerned, especially since the CPU block is adjacent to a section of the PSU, which contains a lot of electrolytic caps. Overall lecroy didn't do very well (IMO) as far as cooling solutions for this chassis.
This might all be un-necessary/overkill, but if anything the added noise from the CPU fan running at full tilt all the time is enough to justify the attempt (for me).
When I strip it down again, for HDD and wiring changes, I will try these mods. I found a slick, straight through, IDE/SATA bridge....I was going to modify it's connectors and mount, to clamp directly to the replacement SATA drives chassis. I want to minimize the ribbon cable slack and keep it from bunching in the chassis (obsessive I know).
i will update this thread with more pictures of the mods, when I tear it down again. I might also modify the MOBO chassis upper panel (that holds the LC bus connector) to space a tad bit higher. It doesn't align as well as it should, and I am concerned about potential strain on the connector. A couple slim nylon washers should give it a extra mm and bring the connector up just a bit on the side panel cutout.