Before usage as true isolation transformer, be aware of actual wiring inside:- Input live/neutral is isolated from output live/neutral (obviously)
- Input/output earth is not connected to any winding (check to be sure, some medical transformers have output neutral and earth connected).
- Input earth is carried through to output earth (!!!) - one may have to take this into account in some situations or make modifications as needed. Having carried through earth may compromise "isolation" in some measurement situations.
Are you saying that this one have earth carried throuhg?, or that one in general should check that on such transformers?
For me the issue is the earth, want to use it on the occasions where I don't want to blow up the scope 
To my knowledge, earth is carried though almost always. I consider carried earth default setup for any transformer unless stated otherwise. I strongly suggest to test for continuity on all isolation transformers before use - text labels and indications may be misleading.
As to transformer in question, Noratel IMED
e 150, see page 15 from manufacturer's brochure
IMED medical PSUs-medical-isolation-transformers-230v-150va/?action=dlattach;attach=246261)
Also, as can be seen in pictures
"Output floating, Neutral not grounded"
From pics on the first post.
Thus, my best guess is that input/output windings are completely isolated from earth. Earth itself is carried through.
Anyway, I will have a real thing to test and use soon. I will make modification inside transformer or make special cable to break earth on output.
If there is no earthed wire there is no neutral.
True in literal term usage, but that is only nomenclature. "Neutral" can kill you, so why is it called "neutral"? I consider "neutral" equal to "live", because both comes from same transformer. Let's not go to linguistics of L vs N.
I was referring more to IEC C13 and C14 plugs/sockets - these have small letters L/N/E on them. Letters allows to identify and name wires w.r.t. IEC socket/plug.
My point is that these IEC connectors are "polarised" at least with naming convention L/N/E - irrespective of what is connected to actual pins.