This is not an entry-level project! Apparently, you will have to do some serious homework in order to become able to create designs that work as expected. Fortunately, every little detail of that
black art is out there, awaiting to be accessed, learned, combined and internalised. Do not be afraid to look up the terms that you think you understand; there is always something more to learn about anything, and the little details are always the ones that can really make a difference.
Anyway, this is not only
an excellent tutorial on the Nixie Clock project you are building; it is an extremely detailed teaching course, written by a brilliant author, on the use of high-voltage DC-DC converters, inductors and drivers, RTCs and of all the other project subsystems as well as the use of the microcontroller itself, with schematics, source code and references most of the textbooks would not even dream of touching!
And, yes, a single "anaemic" m48 microcontroller can easily run everything!
As a side note, do never think of the mains power supply as an accurate frequency reference.
It is not!-George