Me thinks you're getting a bit ahead of yourself.
All that you need be concerned with as far as signal amplitude happens on/in sections; Input Amp P36, Vert Preamp P37 and V-OUT P38 in where the Y+ and Y- outputs to the CRT plates are taken from.
Only these 3 schematics need be of interest for the vertical amplitude signal path.
The block diagram on P35 is helpful to get your bearings as to where the bits that matter for this repair are.
Now, fantastic you have another scope!
The simplest waveform source is the probe Cal 1KHz signal and apply it to both scope inputs even with just a jumper wire. With the Kikusui just follow the input path until you find where things go nuts between the 2 channel comparison.
If both scopes have earthed mains don't worry about the probe reference (Gnd) lead (remove it !) and then there's much less chance of ground loop shorts. We're not so much worried about absolute signal integrity as amplitude comparisons.
Also a careful study of the 3 schematics reveals a few test point values especially approaching P301 on the 2nd schematic. There's 2 sorts of values, those with v/div and just V. Just V is a DC value but check the text for mention of a specific scope setup for those values to be valid.
Have a fiddle with all this and get back to us.
Edit
Actually IMO the fault will at or before the section called the 'diode gate'. (8 diodes, you'll find them)